Publications, Data, and Talks

Peer-reviewed articles

  • Girelli, G., Custodio, J., Kallas, T., Agostini, F., Wernersson, E., Spanjaard, B., Mota, A., Kolbeinsdottir, S., Gelali, E., Crosetto, N. and Bienko, M., 2020. GPSeq reveals the radial organization of chromatin in the cell nucleus. Nature biotechnology, 38(10), pp.1184-1193.
    (link) (pdf) (SI) (data)

  • Gelali, E., Girelli, G., Matsumoto, M., Wernersson, E., Custodio, J., Mota, A., Schweitzer, M., Ferenc, K., Li, X., Mirzazadeh, R. and Agostini, F., 2019. iFISH is a publically available resource enabling versatile DNA FISH to study genome architecture. Nature communications, 10(1), pp.1-15.
    (link) (SI) (pdf)

  • Rubin, M.A., Girelli, G. and Demichelis, F., 2016. Genomic correlates to the newly proposed grading prognostic groups for prostate cancer. European urology, 69(4), pp.557-560.
    (link) (pdf)

  • Digiacomo, F., Girelli, G., Aor, B., Marchioretti, C., Pedrotti, M., Perli, T., Tonon, E., Valentini, V., Avi, D., Ferrentino, G. and Dorigato, A., 2014. Ethylene-producing bacteria that ripen fruit. ACS synthetic biology, 3(12), pp.935-938.
    (link) (pdf)

  • Francis, A.C., Di Primio, C., Quercioli, V., Valentini, P., Boll, A., Girelli, G., Demichelis, F., Arosio, D. and Cereseto, A., 2014. Second generation imaging of nuclear/cytoplasmic HIV-1 complexes. AIDS research and human retroviruses, 30(7), pp.717-726.
    (link (pdf)

Book Chapters

  • Gelali, E., Custodio, J., Girelli, G., Wernersson, E., Crosetto, N., Bienko, M., 2018. An Application-Directed, Versatile DNA FISH Platform for Research and Diagnostics. Methods in molecular biology, 1766, pp.303-333.


  • [PhD thesis] Girelli, G. Methods Development for the Investigation of the Mammalian Genome Radial Architecture: the Quantitative Side. Karolinska Institutet (Sweden), 2021.


  • Girelli, G., Custodio, J., Kallas, T., et al., Nature Biotechnology, 2020
    Source data for manuscript figure panels.


  • [Online Junior presentation] “A journey to the center of the nucleus – developing GPSeq” at INC academy from the International Nucleome Consortium. (YouTube)
Publications, Data, and Talks
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